Sources

Overview

The source code of OpenMS, PyProphet and msproteomicstools is provided on GitHub under the 3-clause BSD license. Please refer to the individual repositories for information regarding obtaining, compiling and installing the components.

OpenMS

OpenSWATH is fully integrated within OpenMS. Please obtain the latest version of OpenMS from GitHub.

Instructions for compilation and installation can be obtained from the OpenMS documentation.

EasyPQP

Please obtain the latest version of EasyPQP from GitHub.

The instructions for the installation of the EasyPQP Binaries is applicable here as well.

PyProphet

Please obtain the latest version of PyProphet from GitHub.

The instructions for the installation of the PyProphet Binaries is applicable here as well.

msproteomicstools & TRIC

Please obtain the latest version of msproteomicstools from GitHub.

The instructions for the installation of the msproteomicstools Binaries is applicable here as well.

DIAlignR

Please obtain the latest version of DIAlignR from GitHub.

The instructions for the installation of the DIAlignR Binaries is applicable here as well.

ARYCAL

Please obtain the latest verson of ARYCAL from Github.

The instructions for building ARYCAL from source can be found on the Github README Build from Source section.

MOBI-DIK & diapysef

Please obtain the latest version of diapysef from GitHub.

The instructions for compilation and installation of diapysef Binaries is applicable here as well.